BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039C12SP1|AL430687
(940 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1732 1810 0.0
>3x_Contig1732
Length = 24266
Score = 1810 bits (908), Expect = 0.0
Identities = 929/940 (98%)
Strand = Plus / Minus
Query: 1 gatcaactatttcgaacaatgttttggaagacaagtctccagcataaaatacaagaatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14287 gatcaactatttcgaacaatgttttggaagacaagtctccagcataaaatacaagaatac 14228
Query: 61 gtctcatgtgtatgctggcacagatcttgawatctgtcacaatggactcgggaaggatgg 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 14227 gtctcatgtgtatgctggcacagatcttgaaatctgtcacaatggactcgggaaggatgg 14168
Query: 121 tcaaatcagtataatattgagagatcctaaggrttcacataaggtttactttgagtgtga 180
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct: 14167 tcaaatcagtataatattgagagatcctaaggattcacataaggtttactttgagtgtaa 14108
Query: 181 gatagcttcatgtatacatatagagtwaaagtacaatcattggtggttgakatgagcctt 240
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 14107 gatagcttcatgtatacatatagagtaaaagtacaatcattggtggttgaaatgagcctt 14048
Query: 241 cttctttcctgggaaagatgcaagagcggattcagtactctgccaatgccgcagtttgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14047 cttctttcctgggaaagatgcaagagcggattcagtactctgccaatgccgcagtttgtt 13988
Query: 301 tgctggtttttgatcaacatctattatcgtagccttgacgctccttgtattgcgggacca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13987 tgctggtttttgatcaacatctattatcgtagccttgacgctccttgtattgcgggacca 13928
Query: 361 ggtcaagaaacaggtcacatctcttagcgtcattagcgttgacaaatcatctttcacaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13927 ggtcaagaaacaggtcacatctcttagcgtcattagcgttgacaaatcatctttcacaaa 13868
Query: 421 acgctgagcagcatagagcctctgtgttatactgtcacttgattggrgatactgcagaat 480
||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 13867 acgctgagcagcatagagcctctgtgtaatactgtcacttgattggagatactgcagaat 13808
Query: 481 gtcatcaagaaattcttctggcacttggcgtcctgcaaacagcgtttcgataatcagctc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13807 gtcatcaagaaattcttctggcacttggcgtcctgcaaacagcgtttcgataatcagctc 13748
Query: 541 cggrtcatgtgaaabacagtactcaatatctcttcccttcagcgagttatgtgtacaatt 600
||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13747 cggatcatgtaaaaaacagtactcaatatctcttcccttcagcgagttatgtgtacaatt 13688
Query: 601 cctacaataatcactagattgatacaaccactttggcttgaattcccaagtaatagcatc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13687 cctacaataatcactagattgatacaaccactttggcttgaattcccaagtaatagcatc 13628
Query: 661 attcaatgagcatcgatagatttgattgaaatggtccaactgttcacatgtactatcctt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13627 attcaatgagcatcgatagatttgattgaaatggtccaactgttcacatgtactatcctt 13568
Query: 721 ggcatgcaataaaggcatgactatgcattgcatatgactatcatcgattaagatattctc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13567 ggcatgcaataaaggcatgactatgcattgcatatgactatcatcgattaagatattctc 13508
Query: 781 atctttcaacacattaatccattttgtatcgacaaacacctcttctaacctcatggaaac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13507 atctttcaacacattaatccattttgtatcgacaaacacctcttctaacctcatggaaac 13448
Query: 841 aaccacatcggccaacataggaagtgacctgatcttggaatcgataaactggragttgtc 900
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 13447 aaccacatcggccaacataggaagtgacctgatcttggaatcgataaactggaagttgtc 13388
Query: 901 ctgcacatatgcattgttcctggaaagtttctggtgcctt 940
||||||||||||||||||||||||||||||||||||||||
Sbjct: 13387 ctgcacatatgcattgttcctggaaagtttctggtgcctt 13348
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5915
Number of Sequences: 1807
Number of extensions: 5915
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 940
length of database: 10,358,551
effective HSP length: 16
effective length of query: 924
effective length of database: 10,329,639
effective search space: 9544586436
effective search space used: 9544586436
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)